The Journal of Experimental Biology
Preprints posted in the last 90 days, ranked by how well they match The Journal of Experimental Biology's content profile, based on 17 papers previously published here. The average preprint has a 0.01% match score for this journal, so anything above that is already an above-average fit.
Meschenmoser, M.; Dürr, V.
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The ability of animals to adjust their heading, i.e. to turn, is essential for all walking animals. While several studies have addressed how leg movement or inter-leg coordination may change during turning, relatively little is known about how turning-related changes scale with turn magnitude. Here, we used spontaneous and visually induced turns of unrestrained walking stick insects to test (i) how high-level parameters of unrestrained turning scale with low-level parameters of leg movement, and (ii) the effect of visual guidance on turning parameters. To this end, we used a step change in stationary landmark position in an open-field arena to constrain timing and magnitude of target-directed turns. These visually guided turns were compared with spontaneous turns in an all-white condition. We show that visually induced turns were walked at a larger forward velocity and had fewer short steps than spontaneous turns. The scaling of turning responses was dominated by an increase in turning duration (factor 1.87) rather than turning speed (factor 1.32). Increased rotational velocity correlated with reduced forward velocity, though with flexible timing of both effects. These changes were accompanied by larger shifts in step direction, as well as an increased asymmetry of step types between inner and outer legs, suggesting a mix of distinct turning strategies, that depend on overall turn angle. Future models on six-legged locomotion should thus consider the incorporation of more than one mechanism to govern turning.
Barrios, G.; Olechowski-Bessaguet, A.; Cardoit, L.; Fevrier, T.; Wattignier, A.; Tostivint, H.; Cattaert, D.; Thoby-Brisson, M.; Lambert, F. M.
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Vestibular neurons are core elements of the pathways involved in vestibulo-motor functions, such as vestibulo-spinal and vestibulo-ocular reflexes. To meet behavioral needs, electrophysiological neuronal properties are adequately adapted to the sensory-motor computation sustaining these distinct vestibular reflexes. During frog metamorphosis, there is a complete reorganization of the posturo-locomotor system while the oculomotor system remains minimally changed, probably associated to so far unknown changes in vestibular neuronal properties. We used this unique model to investigate the central developmental mechanisms underlying such a reconfiguration of vestibular-associated behaviors. Central vestibular neurons exhibit two types of electrophysiological phenotypes: tonic neurons with a continuous discharge and phasic neurons with a transitory discharge mainly due to the activation of Kv1.1 channel. Electrophysiological recordings and Kv1.1 immunolabeling of vestibulospinal (VS) and vestibulo-ocular (VO) neurons at both larval and juvenile stages revealed that the majority of VS neurons exhibited a tonic discharge in larvae but a phasic discharge in juvenile, while VO neurons remained mainly tonic throughout development. Changes in phasic and tonic neurons proportions in VS population are partly explained by neurogenesis. But we provide evidences that an electrophysiological phenotype switch is a concomitant developmental mechanism participating in the maturation of these central vestibular neurons. All together our results showed that the maturation process in central vestibular neuronal groups is highly related to the metamorphosis-induced remodeling of vestibulo-motor functions they are involved in, with the ultimate purpose of ensuring an adequate adaptation of neuronal elements properties to the developmental changes of behavioral constrains.
Konno, R. N.; Lichtwark, G. A.; Dick, T. J. M.
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Predictions of skeletal muscle energy consumption under a diverse range of muscle contractile conditions are critical for improving our understanding of locomotion. Existing mathematical models, while capturing the mechanical dependence of energy consuming processes, neglect the time-dependent behaviour and recovery costs associated with regenerating ATP. This time-dependence is important for predicting the energetic response of muscles during repetitive or cyclical tasks like locomotion, where muscle undergoes many contraction cycles. This study presents a novel model to predict energetic rates based on physiological processes: Ca2+ transport costs, cross-bridge cycling costs, and ATP regeneration. Previous mathematical models include the dependence on Ca2+ transport and cross-bridge cycling, but neglect the time-dependent response and the subsequent recovery of ATP following the contraction. Model parameters were obtained from existing data on isolated muscle preparations, and predicted energetic rates were validated on separate datasets across a range of contractile conditions including dynamic, sub-maximal, and twitch contractions. The time-dependent model was able to capture the influence of contraction frequency on peak energetic rates and the time-course of energetic recovery observed experimentally. The model captures key physiological processes while maintaining a minimal number of free parameters and low computational cost. This enables generalisability across muscles and species, and implementation into larger scale musculoskeletal models.
Chen, G.-Y.; Wu, Z.-Y.; Chen, S.-H.; Yang, P.
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Take-off is a fast and energy-efficient strategy for bipedal animals, such as birds, to achieve rapid movement; however, how muscle physiology scales to govern this universal behavior remains unresolved. Research in other species physiologies is not readily applicable. As a result, important questions, whether theropod dinosaurs such as Tyrannosaurus rex were capable of jumping, remain unanswered. In this article, we coupled Lagrangian dynamics with Hills muscle equations and developed new experimental methods to quantify joint rotational stiffness and damping, thereby enabling a systematic description of lower-limb mechanics. The approach establishes a novel kinetic framework that links muscle contractile properties to lower-limb performance without invoking control optimization. Animal observations and tabletop mechanisms validate the framework. The mechanics model reveals that the take-off time of about 0.1 s across body masses of 0.003 to 90 kg is achievable, as heavier birds generate proportionally higher reaction forces. Additionally, Tyrannosaurus rex should be capable of jumping, based on the available physiology data. Beyond evolutionary insights, our framework provides a new methodology for analyzing the mechanical properties of biological joints and informing the design of scalable bio-inspired robots.
Simha, S. N.; Sawicki, G. S.; Cope, T. C.; Ting, L. H.
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Although muscle spindle sensory signals have been extensively studied, little is known about how and why muscle spindle firing is modulated by the central nervous system during movement. Specialized motor neurons to the muscle spindle, i.e. gamma motor neurons, can profoundly alter spindle firing during behavior, but technological limitations hinder our ability to record gamma motor and muscle spindle sensory signals during most behaviors. We used a biophysical model of a muscle spindle within a muscle-tendon unit to simulate how gamma drive may modulate muscle spindle Ia firing during locomotion. Based on a few available recordings from decerebrate animals, we demonstrate that our model, tuned to passive stretch conditions, can reproduce profound changes in muscle spindle firing in response to identical joint motions in locomotor vs. relaxed stretch conditions. Our model can discover phasic patterns of two types of gamma motor neuron drive based on recorded muscle spindle Ia firing and joint motion. By simulating perturbations, we conclude that: 1) sinusoidal activation of static gamma motor neurons during locomotion, encoding intended movement, modulates muscle spindle signals such that they act as sensorimotor feedback signals based on errors from the intended muscle fascicle length; 2) phasic on/off activation of dynamic gamma motor neurons during locomotion acts as an event detector, heightening muscle spindle Ia responses to discrete perturbations. As such, their muscle-within-muscle structure allows the muscle spindle to act as a highly tunable physical internal model of muscle state to guide movement. Our model supports proposed but as-yet-untested theories of muscle spindle function and offers a framework for extending the testing of muscle spindle function to active, behavioral conditions.
Macedo, G.; McKenna, B.; Peters, S.; Nowicki, S.; Lipshutz, S.
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Birdsong mediates territory acquisition and mate choice. In agonistic interactions, local songs generally elicit stronger responses than songs from more distant populations. However, the molecular mechanisms associated with differential responses to local vs. foreign songs are poorly understood. We addressed this knowledge gap by combining behavioral assays in the field with blood transcriptomic analysis, using a within-subjects design to ask whether male song sparrows (Melospiza melodia) show differential gene expression when exposed to playback of local and foreign songs. Transcriptomic profiles reflected the difference in behavioral response to local vs. foreign songs, with individuals exposed to local songs showing greater expression of genes associated with song perception and production, anti-inflammatory responses and energy metabolism. Our study suggests that changes in expression of key molecular pathways correlate with behavioral responses to geographic song variation, providing insight into the potential mechanisms regulating signal recognition and response to social challenges. HighlightsO_LIGene expression in sparrow blood was measured after simulated territorial intrusion. C_LIO_LIStronger response to local songs was associated with differential gene expression. C_LIO_LISong-associated genes (FOXP2, NRXN1) had higher expression when birds heard local songs. C_LIO_LIGene expression in the blood contains potential biomarkers of song recognition. C_LI
Antunes, D. F.; Liu, Z.; Ringler, E.
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Parental care can have pervasive effects on offsprings neurodevelopment. Parent-offspring interactions are often modulated by the neuropeptide oxytocin, which is responsible for the development of social bonds. The development of the oxytocinergic system is dependent on the quality of parental care during the post-natal phase. However, it is yet unknown how post-natal direct interactions can influence the development of the oxytocinergic pathway. Here we tested how an obligate parental care behaviour, tadpole transport in poison frogs, influences the development of the oxytocinergic pathway. To this end, we quantified whole brain expression of oxytocin receptor and oxytocin precursor throughout three developmental stages of A. femoralis tadpoles, before, during and after tadpole transport. Our results show an overall downregulation during tadpole transport, which indicates that during transport tadpoles enter a dormant state to slow down development until they are placed in water. Interestingly, the expression of oxytocin precursor did not vary between the three developmental stages. This might indicate that oxytocin is being recruited during transport, but does not lead to neurodevelopmental changes. In sum, here we present the first evidence of a dormant state during tadpole transport which might be an adaptive response to the terrestrial reproduction in poison frogs.
Akay, T.; Klishko, A. N.; Hanson, C. E.; Rahmati, S. M.; MacKinnon, K. G.; Park, H.; Prilutsky, B. I.
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Body size and limb posture vary widely across mammals and are expected to shape locomotor stability, yet direct comparative evidence remains limited. Here, we tested whether smaller, crouched mammals exhibit greater lateral dynamic stability than larger, more upright species by comparing treadmill walking in mice and cats at dynamically similar speeds. Using kinematic analyses and size normalized measures of stability, we show that mice are substantially more laterally stable than cats. This increased stability is associated with relatively wider step widths and more crouched limb posture, indicating that support geometry and posture play dominant roles in stabilizing locomotion. Despite these differences, both species regulate lateral balance on a step-by-step basis, as revealed by relationships between center of mass motion and subsequent adjustments of the border of support. Our findings demonstrate that locomotor stability does not scale simply with body size but depends critically on posture dependent strategies that differ across species. These results identify lateral stability as a key factor of locomotor adaptation and suggest that crouched postures in small mammals may reduce reliance on active neural control while enhancing robustness in complex environments. SUMMARY STATEMENTLateral dynamic stability during quadrupedal locomotion depends primarily on limb posture and support geometry rather than body size. Smaller mammals achieve greater stability through crouched postures and wider step widths, whereas larger mammals operate closer to stability limits and rely more heavily on active control.
Latreche, A.; Ross, S. A.; Dick, T. J. M.; Konow, N.; Biewener, A. A.; Wakeling, J. M.
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AO_SCPLOWBSTRACTC_SCPLOWMuscle efficiency decreases with increasing size, largely due to a relative decrease in its mechanical output. Muscle mechanical output depends on its activation, strain, and strain rate and thus varies between different muscles within a limb during locomotion. Distinct muscle coordination patterns are required for efficient cycling, and so we would expect that the coordination patterns for efficient cycling or indeed locomotion would change across animal sizes. We tested whether muscle coordination would change with muscle size using data derived from human cycling: this paradigm allowed for controlled changes in both crank torque and cadence, allowing the multifactorial problem of muscle power output to be decomposed. We used kinematic and pedal data from 12 cyclists undergoing steady pedalling at cadences from 80 to 140 r.p.m. and generated musculoskeletal simulations of their movements. We introduced novel multisegment muscle models in the simulation that incorporated the internal muscle mass and thus accounted for the scaling effects of muscle tissue inertia. We solved the simulations for the muscle activity that was required to minimise the metabolic cost during cycling for each condition. The masses of the muscle models were scaled across five orders of magnitude. The predicted muscle activations were classified by Principal Component analysis to identify whether the coordination of muscle activity was modulated across models with different sized muscles. Analysis of variance revealed significant changes in coordination at the large-scale factors. This study shows how the coordination of muscle activity during locomotion will likely change across a range of body sizes due to the non-linear effects of the inertial mass within the muscle tissues.
Treaster, M.; White, M. A.
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Many taxa have evolved heteromorphic sex chromosomes like the XY system found in mammals. In additional to the sex determination gene which directs development of the gonad into an ovary or testis, sex chromosomes can have drastically different gene content, leading to substantial genetic differences between genetic males and females beyond their gonad identity. Studying the effects of these genetic differences is challenging, as the sex chromosomes and sex determination gene are inherited together, so the effects of genetic differences between the X and Y cannot be easily isolated from the hormonal differences produced by the ovary and testis. The threespine stickleback fish has a heteromorphic XY sex chromosome system and a wide range of well documented sex differences in morphology and behaviors, including complex mating behaviors and male-only parental care. Through genetic manipulation of amhy, the newly identified sex determination gene in threespine stickleback, we are able to generate gonadal males and females with either the XX or XY sex chromosome complement and analyze the separate effects of gonadal sex and sex chromosome complement on sexually dimorphic gene expression. We find that sex chromosomes have a larger effect on gene expression than gonadal sex in somatic tissues, while gonadal sex has a larger effect on expression in the gonads. We also find that the X and Y chromosomes are enriched for genes which show differential expression between females and males. Our findings demonstrate the significant biological impact of sex chromosomes outside of primary sex determination and showcase the utility of the threespine stickleback for studying the genetic basis of sex differences.
Buck, G.; Juarez, B.; Lacey, M.; O'Connell, L. A.; Watson-Zink, V. M.
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The shift to terrestrial environments in ancestrally aquatic animals is often associated with key physiological and physical changes, including shifts in respiratory physiology and in some cases, even the evolution of completely novel respiratory structures. Examining how respiration operates across a gradient of submersion states in ancestrally aquatic terrestrial animals may shed light on how complex biological traits shift under different selective regimes. In this work, we begin exploring respiration in terrestrially-adapted land crabs that still use their gills to respire while underwater. We tested the relationship between aquatic respiratory rates, body size, and sex in red devil vampire crabs (Geosesarma hagen) at two ecologically-relevant temperatures. We found small females respire more than small males at 28{degrees}C, while large females respire more than large males at 21{degrees}C. Additionally, body size is a significant factor affecting respiratory rates of both sexes at 21{degrees}C and warmer temperatures significantly increase respiration in small crabs of both sexes. Interactions between these factors also led to emerging trends that can be explained by both physiological rules, such as reproductive investment and surface-to-volume ratios and heat transfer. We also report a temperature coefficient (Q10) of 1.52 for this species, showing an expected 52% change in respiratory and metabolic rate for every 10{degrees}C increase. This work also demonstrates the importance of understanding how and to what extent biological variables like sex and body size interact with abiotic environmental factors when measuring physiological traits in ectothermic invertebrate animals.
Kirk, M. J.; Paules, J.; Fiallo, S. L.; Leeman, A. M.; Meinhart, C. D.; Rothman, J. H.
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Biological phase changes provoked by stress, such as vitrification or gel-sol transitions, enable many organisms, including extremotolerant tardigrades, to enter quiescent states and survive extreme environmental conditions. Protein-driven phase transitions are hypothesized to produce large-scale changes in intracellular viscosity, allowing tardigrades to survive extreme stresses such as desiccation. We report that the tardigrade Hypsibius exemplaris undergoes both large-scale and local increases in intracellular viscosity following exposure to anoxic and hyperosmotic stress. Such dramatic shifts in cellular viscosity would be expected to enhance cellular resilience to physical force. Indeed, we found that tardigrades can survive, behave normally, and reproduce after exposure to the highest simulated hypergravity (HG) achievable in an ultracentrifuge (one million times Earths gravity). In contrast, Caenorhabditis elegans, a similarly sized animal, does not survive these extreme forces owing to loss of cellular integrity. Remarkably, tardigrades frozen during exposure to extreme hypergravitational force show minimal disruption of fine cellular ultrastructure and little evidence of stratification of cellular components whose density varies by nearly a factor of two. Further, exposure to anoxia, hyperosmotic stress, and HG all result in a large increase in reactive oxygen species (ROS), which is required for survival under these extreme environments. Inhibition of NADPH oxidase (NOX) suppresses survival both to HG and hyperosmotic stress. Our findings suggest that intracellular viscosity changes in response to multiple extreme stresses may underlie the resilience of these animals to extraordinary physical stress, and that survival in or recovery from these states relies on ROS signaling via NADPH oxidase. Significance StatementTardigrades are renowned for surviving conditions that are lethal to nearly all other life forms. We reveal two mechanisms that support this resilience: intracellular viscosity changes and NADPH oxidase-mediated ROS signaling. Through direct assessment of the effects of altered cellular material properties, found that tardigrades are resilient to forces up to one million times Earths gravity, establishing them as the most hypergravity-resistant animal currently known.
Gleason, J. M.; Kessen, C. M.; Verma, V.; Bath, E.
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Animals fight for resources to obtain fitness benefits; most contests are intrasexual, and males tend to fight more than females. Although the genetic basis of male aggression is well studied, we know little about the genetic variation of female aggression. Female aggression varies with reproductive status and is potentially influenced not only by her genotype, but also by the genotype of her mate. Here we measured both male and female aggression in a set of Drosophila melanogaster inbred lines by competing each line against a standard competitor. Aggression varied among lines for both sexes, but male and female aggression were not correlated. Female aggression for many lines increased with mating, as expected, but not all lines changed aggression. However, when females were mated to males of different lines, male genotype did not affect the post-mating change in aggression, suggesting that ejaculate-mediated effects do not vary across these lines. The aggression level of the standard opponent was positively correlated with that of focal individuals indicating that individuals modulate their behavior according to the genotype of their opponent.
Ross, S. A.; Schumacher, F. S.; Machado, E.; Sawatsky, A.; Leonard, T. R.; Hopfner, K.; Scott, W. M.; Bossuyt, F. M.; Taylor, W. R.; Herzog, W.
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Muscle force sharing during locomotion is influenced by the mechanical demands of movement and the contractile properties of synergistic muscles. In cats, plantarflexor muscles exhibit distinct functional specialization, with the slow-fibred soleus maintaining relatively constant force across conditions while faster muscles such as the plantaris and gastrocnemius increase force production with increasing locomotor demand. However, it remains unclear whether similar force-sharing patterns occur in larger animals with different musculoskeletal designs. Therefore, the purpose of this study was to examine force sharing between the superficial digital flexor (SDF) and medial gastrocnemius (MG) muscles during treadmill locomotion in sheep. Tendon buckle force transducers were surgically implanted on the SDF and MG tendons of seven sheep, and in vivo muscle forces were recorded during walking and trotting across different speeds and inclines. Both muscles increased force with increasing speed and incline; however, speed had a substantially greater effect than incline. The SDF consistently produced greater absolute force than the MG across all conditions, whereas the MG exhibited slightly larger relative increases in force with increasing speed. Time to peak force decreased with increasing speed in both muscles, although the SDF reached peak force later in stance than the MG across conditions. In contrast to the distinct specialization observed in cats, neither muscle displayed a relatively condition-independent, soleus-like force contribution. These findings suggest that force sharing in sheep is more distributed across synergistic muscles and may reflect the influence of musculoskeletal design, tendon compliance, and mixed fibre-type composition on muscle function in larger species.
Melancon, V.; Reid, H. B.; Bussey, C.; Neill, C. M.; Johansen, J. L.; Steffensen, J. F.; Domenici, P.
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Escape responses are a critical behavioural mechanism influencing survival during predation events. In most species of teleosts and several other lower vertebrates, these responses are triggered by Mauthner cells (M-cells), which generate faster escapes (characterised by higher turning rates and shorter response latencies) than non-M-cell triggered responses. Most adult elasmobranchs lack M-cells and consequently exhibit slower escape response timing than teleosts. Spotted Ratfish (Hydrolagus colliei) are a notable exception in that adults possess M-cells, yet their escape response performance has not been explored. Here, we quantify the kinematics and timing of ratfish escape responses elicited by a mechano-acoustic stimulus. We show that ratfish exhibit higher turning rates and shorter response latencies than other adult chondrichthyans, though their response latencies are also significantly longer than those of teleosts. These findings suggest that retention of M-cells confers enhanced escape performance in ratfish, with important implications for their vulnerability to predator attacks. Summary statementThis study reveals that adult Spotted Ratfish (Hydrolagus colliei) show fast escape response with a performance that is intermediate between teleosts and previously studied elasmobranchs.
Ghosh, S. M.; Vea, I. M.; Wilcox, A. S.; Frankino, W. A.; Shingleton, A. W.
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Across animals, variation in adult body size is accompanied by coordinated variation in the size of individual morphological traits. However, the same morphological trait can scale differently with body size depending on what drives the size variation. In Drosophila melanogaster, for example, wing size scales differently with body size when size varies because of developmental nutrition versus developmental temperature. Whether the genetic basis of size plasticity and scaling is shared across different environmental regulators of size remains unclear, but is central to predicting how selection acts on the developmental mechanisms that regulate trait size, plasticity and morphological scaling. Using ~200 isogenic D. melanogaster lineages, we measured wing and leg size across nutritional and thermal treatments. For each lineage, we estimated nutritional and thermal plasticity for both traits, as well as the wing-leg individual-level scaling relationship, or ILSR, generated by each environmental source of size variation. We found extensive genetic variation in both thermal and nutritional plasticity for wings and legs, and in the slope of the ILSR between them. However, a lineages thermal plasticity was genetically uncorrelated with its nutritional plasticity for either trait, and we detected no genetic correlation between the slopes of thermal and nutritional wing-leg ILSRs. We also found no genetic correlation in the slope of nutritional wing-leg ILSRs across temperatures. Thus, the slope of a lineages nutritional ILSR at 17{degrees}C was not predictive of its slope at 25{degrees}C of 28{degrees}C. Nevertheless, the overall pattern of nutritional ILSRs was conserved across temperatures. These results suggest that the genetic architecture of size plasticity and scaling depends on the environmental source of size variation. Consequently, the evolutionary response of scaling to selection in heterogeneous environments may not be predictable from genetic variation measured in any single environment.
Jacquerie, K.; DiMartino, J. M.; Dalal, A.; Zeng, J.; Marder, E.
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Rising ocean temperatures challenge ectothermic animals to maintain essential behaviors such as movement and feeding. We asked how a complete neuromuscular pathway preserves function when every component process responds differently to warming. In the pyloric system of the crab Cancer borealis, we simultaneously recorded motor nerve activity, muscle membrane potential, and contraction. Warming preserved rhythmic nerve activity and excitatory junctional potentials, but contraction declined and failed first. Fixed low-frequency stimulation, mimicking cold-temperature motor output, resulted in reduced contraction at warm temperatures, whereas higher-frequency stimulation, mimicking warm-temperature motor output, partially restored contraction. Warming hyperpolarized muscle fibers, moving them farther from contraction threshold, but also reduced input resistance, which together limited over-excitability. However, high-potassium stimulation revealed that the muscle contractile machinery remained functional. Thus, warming acts differently across levels, and overlapping compensatory mechanisms help preserve neuromuscular function across a wide range of temperatures. Significance statementCold-blooded animals that live in climates with significant seasonal changes in ambient temperature must have myriad mechanisms to function over a wide range of environmental conditions. We explore the effects of temperature at multiple levels of organization within the stomatogastric system of the crab, Cancer borealis. We find a series of compensatory mechanisms that cooperatively help maintain stable function despite the fact that the motor patterns, neuromuscular junctions and muscle functions are all differently temperature dependent.
Chakraborty, P.; Storey, K. B.
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Anoxia is a major stress for most vertebrates and frequently accompanies harsh winter conditions, particularly in species that spend much of the season frozen solid. North American freeze-tolerant wood frogs (Rana sylvatica) can survive several months without oxygen and endure whole-body freezing for up to eight months of the year, with [~]70% of total body water frozen as extracellular ice, yet revive when temperatures rise in spring. Survival depends on multiple adaptations, including tolerance of prolonged oxygen deprivation while frozen, when breathing and circulation are halted. A key strategy involves hepatic glycogen mobilization, producing large amounts of glucose that are distributed to tissues where it functions both as a cryoprotectant and as a substrate for anaerobic ATP production. The present study examines the role of histone lysine methylation and demethylation in regulating liver proteins under anoxic conditions. Relative protein expression of seven histone methyltransferases (ASH2L-S, ASH2L-L, RBBP5, SETD8, SMYD2, ESET, SETD1), six lysine demethylases (KDM1A, KDM3B, KDM4A, KDM4B, KDM5A, KDM5C), and eight histone marks (H3K4me1, H3K4me2, H3K9me3, H3K27me3, H3K36me3, H3K79me3, H4K20me1, H4K20me3) were evaluated in wood frog liver under control, 4-hour, and 24-hour anoxia exposures. The data indicate that histone lysine methylation and demethylation contribute significantly to transcriptional regulation under anoxia. Specifically, H3K4, H3K36, and H3K79 methylation were associated with transcriptional activation, whereas H3K9, H3K27, and H4K20 methylation correlated with transcriptional repression. These findings highlight the dynamic role of epigenetic regulation in supporting hypometabolism and stress adaptation in freeze-tolerant wood frogs.
Gorman, L. M.; Caon, S. L.; Huffmyer, A. S.; Byrne, M.; Dutertre, S.; Putnam, H. M.; Mills, S. C.
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Crown-of-thorns sea star (CoTS), Acanthaster cf. solaris, outbreaks are a major cause of hard coral cover decline across the west Pacific, threatening coral reefs. Coral taxa vary in susceptibility to CoTS predation from preferred (Acropora spp.) to non-preferred (Porites spp.), yet the mechanisms underlying these differences are poorly understood. We investigated coral defenses during an ongoing CoTS outbreak in Mo'orea, French Polynesia by examining gene expression (including putative toxin genes) in healthy and actively predated colonies of a preferred (Acropora hyacinthus) and a non-preferred (Porites sp.) coral prey species. During predation, A. hyacinthus exhibited molecular signatures of cellular stress responses involving oxidative stress signalling, inflammation, and tissue proteolysis. In contrast, Porites sp. showed enrichment of genes involved in mitochondrial metabolic adjustment and aerobic metabolism, suggesting metabolic compensation to maintain cellular function. Furthermore, A. hyacinthus demonstrated a reactive defense behaviour by differentially expressing toxins (e.g., kunitz-type neurotoxins) while Porites sp. employed constitutive expression of all putative toxins regardless of active predation, suggesting a proactive defense strategy. Together, these findings suggest that preferred and non-preferred coral prey exhibit fundamentally different molecular and defensive strategies during CoTS predation, shedding light on the evolutionary arms race between corals and their predators.
Nicholls, C. M.; Shingleton, A. W.
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In a wide variety of animals, developmental crowding results in adults with smaller bodies. The crowding effect on body size in Drosophila melanogaster is canonically attributed to heightened competition for nutrition. However, whether other consequences of crowding also contribute to its effect on size remains an open question. We tested the relative contributions of nutritional competition, oxygen availability, and larval-generated metabolites to the crowding effect on size. We found that while nutrition explains most of the variation in body size due to crowding, oxygen also contributes in a sex- and nutrition-dependent manner. We found no evidence that larval-generated chemicals affect body size. These data confirm a widely suspected but untested role of nutrition in producing the crowding effect on size in D. melanogaster, while revealing an unexpected role of oxygen, and raise the possibility that behavior may be a mediator of density-dependent plasticity. Research HighlightsWe found that both nutrition and oxygen mediate the crowding effect on size in Drosophila melanogaster.